Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866296.1_cds_XP_016432644.1_28865
CDS Infomation

[gene=LOC107759271] [db_xref=GeneID:107759271] [protein=U-box domain-containing protein 40-like] [protein_id=XP_016432644.1] [location=18862..20304] [gbkey=CDS]
Sequence

ATGGGAAGTGGAAAGCAAAGATGGAGAATCTCCTTCCACAAATCTCCAATAAAAGTAAAA
CACCCTCCAAAGGAATTCATCTGTCCAATTTCTGGTTCTCTCATGGCTGATCCTATAATT
GTCTCTTCAGGCCATACCTTCGAACGTCACTCTGTTCTTGCCTGTAAATCCCTCTCTTTC
ACACCCATTTTACCTGATAATTCTATCCCCAATTTCTCCACTATCATCCCTAATCTCGCC
CTCAAATCCACCATTCTCAACTGGTGCTCTTCTTCCCATATCCATCCTCCTATACCCCTC
GATTTCATCTCTACTGAGAATCTCGTCCGTACATTAATGGCTACCCAAAACACCAATAAT
AGCAAGAATTGTGATGTTATGAACCGGTTCATCGAGTCTGTGTCGGCACAGTTGAATCGT
CAAATTTCTACTACTTCTGAGGAGTCCGTGACTCCTACAAGTCCTCTAACTCGACCCTGC
TGTTACTCTTCAGCGTCCTCCTCCGAAATGGACCCCACAAACCCTAACTCTTGTGGAGAA
GATGAACTCATCGTCAAACTGAAGAGCTCCCAAGTGTTTGAACAAGAAGAAGCTGTGATC
TCACTTAGAAAGCTGACCCGGACCCGGGAAGAAACCCGTTTTCAGCTCTGCACTCCTCGT
TTGCTCTCAGCTCTTCGTTCTCTCATCTCCTCGAGATATGCTTCAGTACAGGTGAACTCC
ATAGCAGCGCTAGTGAACCTCTCCTTAGAAAATGGAAACAAGGTGAAGATTGTTCGTTCT
GGAATTGTTCCGCCGTTAATTGACGTGTTAAAAGGAGGATTCCCTGAATCACAAGAACAT
GCTGCAGGTGCACTTTTCAGTTTAGCTTTGGATGATCAGAACAAAACTGCAATTGGGGTT
TTGGGGGCACTGCCTCCTCTGCTTCACTCTCTCCGTTCTGAGTCGGAACGGATGCGGCAT
GATTCGGCTTTGGCTCTGTATCATCTTTCTTTGGTTCAGAGTAACAGGGCTAAGTTGGTG
AAACTTGGGGCGGTTCAGTCGCTATTAGGCATGGTGAGAACGGGTCATATGACGGGTCGA
ATTCTGTCAATATTATGTAACATGGCAGCTAGTTTAGAGGGGAGAGGATCTATGCTTGAT
GGGGGTGCTGTGGAGTGTTTTGTGGGTATGTTGAGAAAGGGAGAGTTTGATGCAGAATCT
ATTCGTGAGAGTTGTGTTACTGCATTATATGGACTAAGTCATGGTGGACTTAGGTTTAAA
GGATTGGCAAAAGAGGCTGCTGCAGAGGACTTGTTGATAACACTTGAGGAAATTATGGAA
AGTGAGAAAGCCAAGGATAAAGTTAGGAAGATATTGGAGGCGTTGAGGGAGAAACACGAA
GAGGAAGAAGAAATTGACTGGGAGGAGTTGCTTAATTCTCATGGTGATACAAATTCTGCA
TAG

Peptide Sequence

PEP ID

XP_016432644.1
PEP Infomation

PREDICTED: U-box domain-containing protein 40-like [Nicotiana tabacum]
Sequence

MGSGKQRWRISFHKSPIKVKHPPKEFICPISGSLMADPIIVSSGHTFERHSVLACKSLSF
TPILPDNSIPNFSTIIPNLALKSTILNWCSSSHIHPPIPLDFISTENLVRTLMATQNTNN
SKNCDVMNRFIESVSAQLNRQISTTSEESVTPTSPLTRPCCYSSASSSEMDPTNPNSCGE
DELIVKLKSSQVFEQEEAVISLRKLTRTREETRFQLCTPRLLSALRSLISSRYASVQVNS
IAALVNLSLENGNKVKIVRSGIVPPLIDVLKGGFPESQEHAAGALFSLALDDQNKTAIGV
LGALPPLLHSLRSESERMRHDSALALYHLSLVQSNRAKLVKLGAVQSLLGMVRTGHMTGR
ILSILCNMAASLEGRGSMLDGGAVECFVGMLRKGEFDAESIRESCVTALYGLSHGGLRFK
GLAKEAAAEDLLITLEEIMESEKAKDKVRKILEALREKHEEEEEIDWEELLNSHGDTNSA

Transcript Sequence

Gene sequence data has not been registered.